68 constexpr dna15() noexcept = default;
71 constexpr
dna15 & operator=(
dna15 const &) noexcept = default;
72 constexpr
dna15 & operator=(
dna15 &&) noexcept = default;
85 constexpr
dna15(t const & r) noexcept
131 ret[
'U'] = ret[
'T']; ret[
'u'] = ret[
't'];
191inline namespace literals
208constexpr dna15 operator""_dna15(
char const c)
noexcept
227 for (
size_t i = 0; i < n; ++i)
228 r[i].assign_char(s[i]);
constexpr derived_type & assign_char(char_type const chr) noexcept
Assign from a character, implicitly converts invalid characters.
Definition: alphabet_base.hpp:165
static constexpr detail::min_viable_uint_t< size > alphabet_size
The size of the alphabet, i.e. the number of different values it can take.
Definition: alphabet_base.hpp:203
constexpr derived_type & assign_rank(rank_type const c) noexcept
Assign from a numeric value.
Definition: alphabet_base.hpp:191
rank_type rank
The value of the alphabet letter is stored as the rank.
Definition: alphabet_base.hpp:265
The 15 letter DNA alphabet, containing all IUPAC smybols minus the gap..
Definition: dna15.hpp:51
friend base_t
Befriend seqan3::nucleotide_base.
Definition: dna15.hpp:57
static constexpr rank_type rank_complement(rank_type const rank)
Returns the complement by rank.
Definition: dna15.hpp:158
friend rna15
Befriend seqan3::rna15 so it can copy char_to_rank.
Definition: dna15.hpp:62
constexpr dna15() noexcept=default
Defaulted.
static constexpr rank_type rank_complement_table[alphabet_size]
The rank complement table.
Definition: dna15.hpp:139
static constexpr rank_type char_to_rank(char_type const chr)
Returns the rank representation of character.
Definition: dna15.hpp:170
static constexpr char_type rank_to_char_table[alphabet_size]
The lookup table used in rank_to_char.
Definition: dna15.hpp:94
static constexpr char_type rank_to_char(rank_type const rank)
Returns the character representation of rank.
Definition: dna15.hpp:164
static constexpr std::array< rank_type, 256 > char_to_rank_table
Returns the rank representation of character.
Definition: dna15.hpp:114
A CRTP-base that refines seqan3::alphabet_base and is used by the nucleotides.
Definition: nucleotide_base.hpp:43
alphabet_base< dna15, size, char > base_t
Type of the base class.
Definition: nucleotide_base.hpp:46
The 15 letter RNA alphabet, containing all IUPAC smybols minus the gap..
Definition: rna15.hpp:51
The main SeqAn3 namespace.
Definition: cigar_operation_table.hpp:2
constexpr char_type to_lower(char_type const c) noexcept
Converts 'A'-'Z' to 'a'-'z' respectively; other characters are returned as is.
Definition: transform.hpp:81
SeqAn specific customisations in the standard namespace.
Provides seqan3::nucleotide_base.